Comment 31 for bug 1810239
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This problem happens here as well. Asus P9X79 WS, BIOS 3306, X79, i7-3930K. Running kernel 3.7.3. In addition to being unable to use the Marvel SATA controller ports, this causes a ~40s hang during boot.
I tried contacting Asus about this, as I think this could be fixed by a BIOS update, but they replied to me in horrible English they do not support Linux. I'll think twice before buying Asus again in the future, but it would be nice if a workaround could be implemented in the kernel.