Ubuntu
freebayes package

  1. Bug #2024021
  2. Comment #1

Comment 1 for bug 2024021

Revision history for this message
Vladimir Petko (vpa1977) wrote :

The realign test fail due to libwfa2 library issue

Running integration tests for libwfa2 via `./tests/wfa.utest.sh` produces the following results on amd64 platform:

-----------------------
> Comparing ./tests vs ./tests/wfa.utest.check
 [UTest::test.affine2p] OK
[UTest::test.affine] OK
[UTest::test.affine.p0] OK
[UTest::test.affine.p1] OK
[UTest::test.affine.p2] OK
[UTest::test.affine.p3] OK
[UTest::test.affine.p4] OK
[UTest::test.affine.p5] OK
[UTest::test.affine.wfapt0] OK
[UTest::test.affine.wfapt1] OK
[UTest::test.biwfa.affine2p] OK
[UTest::test.biwfa.affine] OK
[UTest::test.biwfa.affine.p0] OK
[UTest::test.biwfa.affine.p1] OK
[UTest::test.biwfa.affine.p2] OK
[UTest::test.biwfa.affine.p3] OK
[UTest::test.biwfa.affine.p4] OK
[UTest::test.biwfa.affine.p5] OK
[UTest::test.biwfa.affine.wfapt0] OK
[UTest::test.biwfa.affine.wfapt1] OK
[UTest::test.biwfa.edit] OK
[UTest::test.biwfa.indel] OK
[UTest::test.biwfa.score.affine2p] OK
[UTest::test.biwfa.score.affine] OK
[UTest::test.biwfa.score.affine.p0] OK
[UTest::test.biwfa.score.affine.p1] OK
[UTest::test.biwfa.score.affine.p2] OK
[UTest::test.biwfa.score.affine.p3] OK
[UTest::test.biwfa.score.affine.p4] OK
[UTest::test.biwfa.score.affine.p5] OK
[UTest::test.biwfa.score.affine.wfapt0] OK
[UTest::test.biwfa.score.affine.wfapt1] OK
[UTest::test.biwfa.score.edit] OK
[UTest::test.biwfa.score.indel] OK
[UTest::test.edit] OK
[UTest::test.indel] OK
[UTest::test.pb.affine2p] OK
[UTest::test.pb.affine] OK
[UTest::test.pb.affine.p0] OK
[UTest::test.pb.affine.p1] OK
[UTest::test.pb.affine.p2] OK
[UTest::test.pb.affine.p3] OK
[UTest::test.pb.affine.p4] OK
[UTest::test.pb.affine.p5] OK
[UTest::test.pb.affine.wfapt0] OK
[UTest::test.pb.affine.wfapt1] OK
[UTest::test.pb.edit] OK
[UTest::test.pb.indel] OK
[UTest::test.score.affine2p] OK
[UTest::test.score.affine] OK
[UTest::test.score.affine.p0] OK
[UTest::test.score.affine.p1] OK
[UTest::test.score.affine.p2] OK
[UTest::test.score.affine.p3] OK
[UTest::test.score.affine.p4] OK
[UTest::test.score.affine.p5] OK
[UTest::test.score.affine.wfapt0] OK
[UTest::test.score.affine.wfapt1] OK
[UTest::test.score.edit] OK
[UTest::test.score.indel] OK
+ grep 'Exit status:' ./tests/wfa.utest.log

------------------------------

S390x tests:
--------------------------------
> Comparing ./tests vs ./tests/wfa.utest.check
 [UTest::test.affine] Error
[UTest::test.affine.p0] Error
[UTest::test.affine.p1] Error
[UTest::test.affine.p2] Error
[UTest::test.affine.p3] Error
[UTest::test.affine.p4] Error
[UTest::test.affine.p5] Error
[UTest::test.affine.wfapt0] Error
[UTest::test.affine.wfapt1] Error
[UTest::test.affine2p] Error
[UTest::test.biwfa.affine] Error
[UTest::test.biwfa.affine.p0] Error
[UTest::test.biwfa.affine.p1] Error
[UTest::test.biwfa.affine.p2] Error
[UTest::test.biwfa.affine.p3] Error
[UTest::test.biwfa.affine.p4] Error
[UTest::test.biwfa.affine.p5] Error
[UTest::test.biwfa.affine.wfapt0] Error
[UTest::test.biwfa.affine.wfapt1] Error
[UTest::test.biwfa.affine2p] Error
[UTest::test.biwfa.edit] Error
[UTest::test.biwfa.indel] Error
[UTest::test.biwfa.score.affine] Error
[UTest::test.biwfa.score.affine.p0] Error
[UTest::test.biwfa.score.affine.p1] Error
[UTest::test.biwfa.score.affine.p2] Error
[UTest::test.biwfa.score.affine.p3] Error
[UTest::test.biwfa.score.affine.p4] Error
[UTest::test.biwfa.score.affine.p5] Error
[UTest::test.biwfa.score.affine.wfapt0] Error
[UTest::test.biwfa.score.affine.wfapt1] Error
[UTest::test.biwfa.score.affine2p] Error
[UTest::test.biwfa.score.edit] Error
[UTest::test.biwfa.score.indel] Error
[UTest::test.edit] Error
[UTest::test.indel] Error
[UTest::test.pb.affine] Error
[UTest::test.pb.affine.p0] Error
[UTest::test.pb.affine.p1] Error
[UTest::test.pb.affine.p2] Error
[UTest::test.pb.affine.p3] Error
[UTest::test.pb.affine.p4] Error
[UTest::test.pb.affine.p5] Error
[UTest::test.pb.affine.wfapt0] Error
[UTest::test.pb.affine.wfapt1] Error
[UTest::test.pb.affine2p] Error
[UTest::test.pb.edit] Error
[UTest::test.pb.indel] Error
[UTest::test.score.affine] Error
[UTest::test.score.affine.p0] Error
[UTest::test.score.affine.p1] Error
[UTest::test.score.affine.p2] Error
[UTest::test.score.affine.p3] Error
[UTest::test.score.affine.p4] Error
[UTest::test.score.affine.p5] Error
[UTest::test.score.affine.wfapt0] Error
[UTest::test.score.affine.wfapt1] Error
[UTest::test.score.affine2p] Error
[UTest::test.score.edit] Error
[UTest::test.score.indel] Error

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