/etc/resolvconf/interface-order is only supposed to determine the order in which interfaces are preferred as sources of DNS configuration, it should certainly not cause the DNS servers for an interface to be ignored completely. Please attach your full /etc/network/interfaces, as well as the contents of the /run/resolvconf directory (in particular, the /run/resolvconf/interface subdirectory).
/etc/resolvconf /interface- order is only supposed to determine the order in which interfaces are preferred as sources of DNS configuration, it should certainly not cause the DNS servers for an interface to be ignored completely. Please attach your full /etc/network/ interfaces, as well as the contents of the /run/resolvconf directory (in particular, the /run/resolvconf /interface subdirectory).