libhts-dev binary package in Ubuntu Jammy armhf
HTSlib is an implementation of a unified C library for accessing common file
formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call
Format), used for high-throughput sequencing data, and is the core library
used by samtools and bcftools. HTSlib only depends on zlib. It is known to be
compatible with gcc, g++ and clang.
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HTSlib implements a generalized BAM (binary SAM) index, with file extension
‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the
new index and then for the old if the new index is absent.
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This package contains development files for the HTSlib: headers, static
library, manual pages, etc.
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For compatibility with sambamba, the internal routine cram_to_bam was
exported, hereto adopting a patch found in guix.
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
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2021-12-09 13:59:55 UTC | Published | Ubuntu Jammy armhf | release | universe | libdevel | Optional | 1.13+ds-2build1 | ||
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Deleted | Ubuntu Jammy armhf | proposed | universe | libdevel | Optional | 1.13+ds-2build1 | |||
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2021-12-09 14:01:10 UTC | Superseded | Ubuntu Jammy armhf | release | universe | libdevel | Optional | 1.13+ds-2 | ||
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