Ubuntu
samtools package

autopkgtest fails in bionic

  1. Bionic (18.04)
  2. Bug #1907959
Bug #1907959 reported by Balint Reczey
6
This bug affects 1 person
Affects Status Importance Assigned to Milestone
Auto Package Testing
Fix Released
Undecided
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samtools (Ubuntu)
New
Undecided
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Bionic
New
Undecided
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Bug Description

https://objectstorage.prodstack4-5.canonical.com/v1/AUTH_77e2ada1e7a84929a74ba3b87153c0ac/autopkgtest-bionic/bionic/amd64/s/samtools/20201213_121857_20b83@/log.gz

...
 291: Subsample 0.5 (CRAM input) ...[E::cram_populate_ref] Mismatching md5sum for downloaded reference
[E::cram_get_ref] Failed to populate reference for id 0
[E::cram_decode_slice] Unable to fetch reference #0 1..100235
[E::cram_next_slice] Failure to decode slice
[main_samview] truncated file.
double free or corruption (fasttop)
...

Revision history for this message
Balint Reczey (rbalint) wrote :

Passes locally, may be a proxy issue.

tags: added: update-excuse-bionic
removed: update-excuse
Revision history for this message
Balint Reczey (rbalint) wrote :

Maybe a dup of LP: #1908136.

Iain Lane (laney)
Changed in auto-package-testing:
status: New → Fix Released
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