t-coffee 11.00.8cbe486-6 source package in Ubuntu
Changelog
t-coffee (11.00.8cbe486-6) unstable; urgency=medium * Standards-Version: 4.1.0 (no changes needed) * Fix some string assignments which fail build with gcc-7 Closes: #853677 * d/rules: do not parse d/changelog -- Andreas Tille <email address hidden> Mon, 28 Aug 2017 15:27:17 +0200
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- science
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section | |
---|---|---|---|---|
Bionic | release | universe | science |
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
t-coffee_11.00.8cbe486-6.dsc | 2.1 KiB | 74c83c8f7591b6fcb62aa3148db2315600d49bd61f3880f805a5691f3ca31c4e |
t-coffee_11.00.8cbe486.orig.tar.gz | 3.4 MiB | b8018433574ff7705c49cd974bebb06a48eb8bc5e38aaa9eb4f53f2e7778e72c |
t-coffee_11.00.8cbe486-6.debian.tar.xz | 15.5 KiB | 842506d55d33cb9127d2413d89e71fd5de8815e35b2b9466983cca226c74d508 |
Available diffs
No changes file available.
Binary packages built by this source
- t-coffee: Multiple Sequence Alignment
T-Coffee is a multiple sequence alignment package. Given a set of
sequences (Proteins or DNA), T-Coffee generates a multiple sequence
alignment. Version 2.00 and higher can mix sequences and structures.
.
T-Coffee allows the combination of a collection of multiple/pairwise,
global or local alignments into a single model. It can also
estimate the level of consistency of each position within the new
alignment with the rest of the alignments. See the pre-print for more
information
.
T-Coffee has a special called M-Coffee that makes it possible to combine the
output of many multiple sequence alignment packages. In its published version,
it uses MUSCLE, PROBCONS, POA, DiAlign-TS, MAFFT, Clustal W, PCMA and
T-Coffee. A special version has been made for Debian, DM-Coffee, that uses
only free software by replacing Clustal W by Kalign. Using the 8 Methods of
M-Coffee can sometimes be a bit heavy. You can use a subset of your favorite
methods if you prefer.
- t-coffee-dbgsym: debug symbols for t-coffee
- t-coffee-examples: annotated examples for the use of T-Coffee
To help increasing the proficiency in the use of T-Coffee, this
package provides examples for input sequences and their proper
alignment.